Publications


2018

* International collaborative Papers
Papers where “ GI-CoRE” is stated as an affiliated institution

  1. *Harlyan LI., Wu D., Kinashi R., Kaewnern M., Matsuishi T. Validation of a feedback harvest control rule in data-limited conditions for managing multispecies fisheries. Canadian Journal of Fisheries and Aquatic Sciences, (in submission 2019)
  2. *Glasgow E.M., Vander Meulen K.A., Takasuka T.E., Bianchetti C.M., Bergeman L.F., Deutsch S. and Fox B.G. Extent and origins of functional diversity in a subfamily of glycoside hydrolases. Journal of Molecular Biology, doi: 10.1016/j.jmb.2019.01024 (in press)
  3. *Popko J.T., Sang H., Lee J., Yamada T., Hoshino Y., Jung G. Resistance of Sclerotinia homoeocarpa field isolates to succinate dehydrogenase inhibitor fungicides. Plant Disease, 102(12), 2625-2631 (2018)
  4. *Kessler D., Sang H., Bousquet A., Hulvey J.P., Garcia D., Rhee S., Hoshino Y., Yamada T., Jung G. Nucleic adaptability of heterokaryons to fungicides in a multinucleate fungus, Sclerotinia homoeocarpa. Fungal Genetics and Biology, 115, 64-77 (2018)

Papers which mentioning “Hokkaido University” in the acknowledgements

  1. *Guizani M., Hassan Hamedah, Nikeyama Benedicte, Ito Ryusei, Funamizu Naoyuki. Ammonia Diffusion through a semipermeable membrane during Forward osmosis process. 6th International Dry Toilet Conference (peer reviewed)
  2. *Dong K.T.P., Saito Y., Hoa N.T.N., Dan T.Y., Matsuishi T. Pressure–State–Response of traceability implementation in seafood-exporting countries: Evidence from Vietnamese shrimp products. Aquaculture International (in submission 2019)
  3. *Schauberger B., Ben-Ari T., Makowski D., Kato T., Kato H., Ciais P. Yield trends, variability and stagnation analysis of major crops in France over more than a century. Scientific Reports, 8 (1), 16865. doi: 10.1038/s41598-018-35351-1 (2018)
  4. *Kabiraz D. C., Morita K., Sakamoto K., Takahashi M., Kawaguchi T. Highly sensitive detection of clenbuterol in urine sample by using surface plasmon resonance immunosensor. Talanta, 186, 521-526 (2018)
  5. *Kabiraz D. C., Morita K., Sakamoto K., Kawaguchi T. Mechanism of surface plasmon resonance sensing by indirect competitive inhibition immunoassay using Au nanoparticle labeled antibody. Talanta, 172, 1-7 (2017)
  6. *Kabiraz D. C., Morita K., Kawaguchi T., Takahashi M. SPR biosensing for detection of Beta Agonist in urine of cow. On-line Chemical Sensors, 33, B, 66-68 (2017)
  7. Suzuki T., Sakumoto R., Hayashi KG., Ogiso T., Kunii H., Shirozu T., Kim S.W., Bai H., Kawahara M., Kimura K., Takahashi M. Involvement of IFNT in the induction of apoptotic, pyroptotic and autophagic cell death-related signaling pathways in bovine uterine endometrium during early pregnancy. Journal of Reproduction and Development, 64, 495-502 (2018)
  8. Talukder M.A.S., Balboula A.Z., Shirozu T., Kim S.W., Kunii H., Suzuki T., Ito T., Kimura K., Takahashi M. Activation of lysosomal cathepsins in pregnant bovine leukocytes. Reproduction, 155, 515-528 (2018)
  9. Guizani M., Takeru Maeda, Ryusei Ito, Naoyuki Funamizu. Synthesis and characterization of magnetic nanoparticles as a candidate draw solution for Forward Osmosis. Journal of Water and Environment Technology, 16(1), 63–71 (2018)
  10. Guizani M., Kento Yajima, Toshikazu Kawaguchi, Ryusei Ito, Naoyuki Funamizu. Evaluation of in situ water electrochemical disinfection using novel carbon-based and noble metal electrodes. Euro-Mediterranean Journal for Environmental Integration, 3, 31-35 (2018)
  11. Guizani M., Takahiro Endo, Ryusei Ito, Naoyuki Funamizu. Development of PEG coated MNPs as novel Draw solution. 3rd International Conference on Integrated Environmental Management for Sustainable Development, Research Letter, ISSN: 1737-3638 (2018)
  12. Kuroda M., Sasaki M., Yamada K., Miki N., Matsui N., Matsuishi T. Click emission in Dall’s porpoise Phocoenoides dalli, focusing on physical properties of tissues. PLoS ONE, 13(9) e0202426 (2018)
  13. Higashisaka H., Matsuishi T., Akamatsu T. Presence and behavior of harbor porpoises (Phocoena phocoena) around set nets revealed using passive acoustic monitoring. Fisheries Research, 204, 269-274 (2018)18. Kawaguchi T., Kabiraz D.C., Morita K., Takahashi M. Surface Plasmon Resonance immunosensor using secondary immunoreaction. On-line Chemical Sensors, 34, A, 34-36 (2018)
  14. Zhuykov S., Kawaguchi T. Hai Z., Albari M.K., Heynderickx P.M. Interfacial engineering of two-dimensional nano-structured materials by atomic layer deposition. Applied Surface Science, 392, 231-243 (2017)
  15. Kabiraz D.C., Morita K., Kawaguchi T. Kinetic Study of Secondary Immunoreaction in indirect competitive inhibition immunoassay. On-line Chemical Sensors, 33, A, 125-127 (2017)

Other Original Papers

  1. *21. Rohollahi I., Khoshkholghsima N.A., Nagano H., Hoshino Y., Yamada T. Respiratory burst oxidase-D expression and biochemical responses in Festuca arundinacea under drought stress. Crop Science, 58(1), 435-442 (2018)
  2. *Yoo J.H., Seong E.S., Ghimire B.K., Heo K., Jin X., Yamada T., Clark L.V., Sacks E.J., Yu C.Y. Establishment of Miscanthus sinensis with decreased lignin biosynthesis by Agrobacterium–mediated transformation using antisense COMT gene. Plant Cell, Tissue and Organ Culture, 133, 359–369 (2018)
  3. *Clark L., Jin X., Petersen K., Anzoua K., Bagmet L., Chebukin P., Deuter M., Dzyubenko E., Dzyubenko N., Heo K., Johnson D., Jørgensen U., Kjeldsen J., Nagano H., Peng J., Sabitov A., Yamada T., Yoo J.H., Yu C.Y., Long S., Sacks E. Population structure of Miscanthus sacchariflorus reveals two major polyploidization events, tetraploid-mediated unidirectional introgression from diploid M. sinensis, and diversity centered around the Yellow Sea. Annals of Botany, doi: 10.1093/aob/mcy161 (2018)
  4. *Huang L., Flavell R., Donnison I., Chiang Y-C., Hastings A., Hayes C., Heidt C., Hong H., Hsu T.W., Humphreys M., Jackson J., Norris J., Schwarz K-U., Squance M., Swaller T., Thomas I., van Assche W., X. Qi, Yamada T., Youell S., Clifton-Brown J.C. Collecting wild Miscanthus germplasm in Asia for crop improvement and conservation in Europe whilst adhering to the guidelines of the United Nations. Annals of Botany, doi: 10.1093/aob/mcy231 (2018)
  5. *Nakajima T., Yamada T., Anzoua K.G., Kokubo R., Noborio K. Carbon sequestration and yield performances of Miscanthus × giganteus and Miscanthus sinensis. Carbon Management, Doi: 10.1080/17583004.2018.1518106 (2018)
  6. *Clifton-Brown J., Harfouche A., Casler M.D., Jones H.D., Macalpine W.J., Murphy-Bokern D., Smart L.B., Adler A., Ashman C., Awty-Carroll D., Bastien C., Bopper S., Botnari V., Brancourt-Hulmel M., Chen Z., Clark L.V., Cosentino S., Dalton S., Davey C., Dolstra O., Donnison I., Flavel R., Greef J., Hanley S., Hastings A., Hertzberg M., Hsu T-W., Huang L., Iurato A., Jensen E., Jin X., Jørgensen U., Kiesel A., Kim D-S., Liu J., McCalmont J.P., McMahon B.G., Mos M., Robson P., Sacks E.J., Anatolii Sandu A., Scalici G., Schwarz K., Scordia D., Shafiei R., Shield I., Slavov G., Stanton B.J., Swaminathan K., Taylor G., Torres A.F., Trindade L.M., Tschaplinski T., Tuskan J., Yamada T., Yu C.Y., Zalesny R-F., Zong J., Lewandowski I. Breeding progress and preparedness for mass‐scale deployment of perennial lignocellulosic biomass crops switchgrass, miscanthus, willow and poplar. Global Change Biology Bioenergy, Doi: 10.1111/gcbb.12566 (2018)
  7. *Dong H., Green S., Nishiwaki A., Yamada T., Stewart J.R., Deuter M., Sacks E. Winter hardiness of Miscanthus (I): Overwintering ability and yield of new Miscanthus × giganteus genotypes in Illinois and Arkansas. Global Change Biology Bioenergy, Doi: 10.1111/gcbb.12588 (2018)
  8. *Hamamoto T., Chirwa M., Nyambe I., Uchida Y. Small-scale variability in the soil microbial community structure in a semideveloped farm in Zambia. Applied and Environmental Soil Science, Article ID 7939123. 15 (2018)
  9. *Yuan H., Zhang Z., Qin S., Zhou S., Hu C., Clough T., Wrage-Mönnig N., Luo J., Conrad R. Effects of nitrate and water content on acetylene inhibition technique bias when analysing soil denitrification rates under an aerobic atmosphere. Geoderma, 334, 33-36 (2019)
  10. *Wells N.S., Clough T.J., Johnson-Beebout S.E., Elberling B., Baisden W.T. Effects of denitrification and transport on the isotopic composition of nitrate (δ18O, δ15N) in freshwater systems. Science of the Total Environment, 651, 2228-2234 (2019)
  11. *Stenger R., Clague J.C., Morgenstern U., Clough T.J. Vertical stratification of redox conditions, denitrification and recharge in shallow groundwater on a volcanic hillslope containing relict organic matter. Science of the Total Environment, 639, 1205-1219 (2018)
  12. *Chamindu Deepagoda T.K.K., Smits K., Jayarathne J.R.R.N., Wallen B.M., Clough T.J. Characterization of grain-size distribution, thermal conductivity, and gas diffusivity in variably saturated binary sand mixtures. Vadose Zone Journal, 17 (1), art. no.180026 (2018)
  13. *Ciganda V.S., López-Aizpún M., Repullo M.A., Wu D., Terra J.A., Elustondo D., Clough T., Cardenas L.M. Soil nitrous oxide emissions from grassland: Potential inhibitor effect of hippuric acid. Journal of Plant Nutrition and Soil Science, Doi:10.1002/jpln.201700393 (2018)
  14. Asakuma S., Ueda Y., Akiyama F., Uchida K., Katano N., Kawamura S., Mitani T. Effect of grazing and processing treatments on sensory characteristics of cow milk. Journal of Milk Science, 67(1), 22-29 (2018)
  15. Chen J., Kudo H., Kan K., Kawamura S., Koseki S. Growth-Inhibitory Effect of d-Tryptophan on Vibrio spp. in Shucked and Live Oysters. Applied and Environmental Microbiology, 84(19), e01543-18 (2018)
  16. Abe H., Koyama K., Kawamura S., Koseki S. Stochastic evaluation of Salmonella enterica lethality during thermal inactivation. International Journal of Food Microbiology, 285, 129-135 (2018)
  17. Lee J.H., Morita A., Kuroshima M., Kawamura S., Koseki S. Development of a novel time-temperature integrator/indicator (TTI) based on the maillard reaction for visual monitoring of melon (Cucumis melo L.) maturity during cultivation. Journal of Food Measurement and Characterization, 12(4), 2899-2904 (2018)
  18. Koyama K., Abe H., Kawamura S., Koseki S. Stochastic simulation for death probability of bacterial population considering variability in individual cell inactivation time and initial number of cells. International Journal of Food Microbiology, 290, 125-131 (2019)
  19. Jian Gao, Joelle Sasse, Kyle M. Lewald, Kateryna Zhalnina, Lloyd T. Cornmesser, Todd A. Duncombe, Yasuo Yoshikuni, John P. Vogel, Mary K. Firestone, Trent R. Northen. Ecosystem fabrication (EcoFAB) protocols for the construction of laboratory ecosystems designed to study plant-microbe interactions. Journal of Visualized Experiments, 134, Doi: 10.3791/57170 (2018)
  20. Cameron R. Coates, Benjamin P. Bowen, Ernst Oberortner, Linda Thomashow, Michalis Hadjithomas, Zhiying Zhao, Jing Ke, Leslie Silva, Katherine Louie, Gaoyan Wang, David Robinson, Angela Tarver, Matthew Hamilton, Andrea Lubbe, Meghan Feltcher, Jeff Dangl, Amrita Pati, David Weller, Trent R. Northen, Jan-Fang Cheng, Nigel J. Mouncey, Samuel Deutsch, Yoshikuni Y. An integrated workflow for phenazine-modifying enzyme characterization. Journal of Industrial Microbiology and Biotechnology, 45(7), 567-577, Doi: 10.1007/s10295-018-2025-5 (2018)
  21. Arkar Myo, T. Darabanandana, A. Boutson, M. Kaewnern. Status of trash fish from Bottom Trawl Fishery and utilization in Myeik Township, Tanintharyi Region, Myanmar. Journal of Fisheries and Environment, 42 (3), 1-12 (2018)
  22. Bundao S., N. Veeravaitaya, M. Kaewnern, S. Ingthamjit. The relationship between land use and water quality in Bangpakong estuary, Thailand. Journal of Fisheries and Environment, 42 (2), 24-31 (2018)
  23. Fujii Y., Kato Y., Sakamoto K., Matsuishi T., Harada K., Koizumi A., Kimura O., Endo T., Haraguchi K. Different profiles of naturally produced and anthropogenic organohalogens   in the livers of cetaceans from the Sea of Japan and the North Pacific Ocean. Marine   Pollution Bulletin, 136, 230-242 (2018)
  24. Yoshiyama T., Tsuboi J., Matsuishi T. Consumption activities and expenditure of anglers targeting endangered fishes in Hokkaido Lakes, Japan. Nippon Suisan Gakkaishi, 84(5), 858-871 (2018)
  25. Shindo J., Sekizawa K., Okada A., Matsui N., Matsuida A., Matsuishi T. Morphological Study on the tongue of a Neonate Minke whale (Balaenoptera acutorostrata). Japanese Journal of Zoo and Wildlife Medicine, 23(3), 77-82 (2018)
  26. Akizawa H., Yanagawa Y., Nagano M., Bai H., Takahashi M., Kawahara M. Significance of CCN2 expression in bovine preimplantation development. Animal science Journal, 64, 495-502 (2018)
  27. Iwasaki W., Yamanaka K., Sugiyama D., Teshima Y., Briones-Nagata M.P., Maeki M., Yamashita K., Takahashi M., Miyazaki M. Simple separation of good quality bovine oocytes using a microfluidic device. Scientific Reports, 8(1), 14273 (2018)
  28. Abdel-Ghani M.A., Yanagawa Y., Balboula AZ., Sakaguchi K., Kanno C., Katagiri M., Takahashi M., Nagano M. Astaxanthin improves the developmental competence of in vitro-grown oocytes and modifies the steroidogenesis of granulosa cells derived from bovine early antral follicles. Reproduction, Fertility and Development, 32(2), 272-281 (2018)
  29. Li G., Otsuka Y., Matsumiya T., Suzuki T., Li J., Takahashi M., Yamada K. A Straightforward substitution strategy to tune BODIPY dyes spanning the near-infrared region via Suzuki⁻Miyaura Cross-Coupling. Materials (Basel, Switzerland), 11(8), doi:10.3390/ma11081297 (2018)
  30. Yamanaka KI., Yamashita K., Khatun H., Wada Y., Tatemoto H., Sakatani M., Takenouchi N., Takahashi M., Watanabe S. Normal DNA methylation status in sperm from a somatic cell cloned bull and their fertilized embryos. Animal Science Journal. 89, 1406-1414 (2018)
  31. Yamanaka KI., Khatun H., Egashira J., Balboula AZ., Tatemoto H., Sakatani M., Takenouchi N., Wada Y., Takahashi M. Heat-shock-induced cathepsin B activity during IVF and culture compromises the developmental competence of bovine embryos. Theriogenology, 114, 293- 300 (2018)
  32. Akizawa H., Kobayashi K., Bai H., Takahashi M., Kagawa S., Nagatomo H., Kawahara M. Reciprocal regulation of TEAD4 and CCN2 for the trophectoderm development of the bovine blastocyst. Reproduction, 155, 563-571 (2018)
  33. Kunii H., Koyama K., Ito T., Suzuki T., Balboula AZ., Shirozu T., Bai H., Nagano M., Kawahara M., Takahashi M. Hot topic: Pregnancy-induced expression of interferon-stimulated genes in the cervical and vaginal mucosal membranes. Journal of Dairy Science, 101, 8396-8400 (2018)
  34. 鈴木惇文・木村康二・唄花子・川原学・高橋昌志.インターフェロン-τ化学合成ペプチドによるウシ子宮内膜細胞活性リガンド領域の探索. 北海道畜産草地学会報,(印刷中)
  35. Gonzales J.N., Matson M.M., Atsumi S. Nonphotosynthetic biological CO2 reduction. Biochemistry, doi: 10.1021/acs.biochem.8b00937 (2018)
  36. Carroll A.L., Case A.E., Zhang A., Atsumi S. Metabolic engineering tools in model cyanobacteria. Metabolic Engineering, 50, 47-56. doi:10.1016/j.ymben.2018.03.014 (2018)
  37. Tashiro Y., Hirano S., Matson M.M., Atsumi S., Kondo A. Electrical-biological hybrid system for CO2 reduction. Metabolic Engineering, 47, 211-218. doi:10.1016/j.ymben.2018.03.015 (2018)
  38. Kontur W.S., Bingman C.A., Olmsted C.N., Wassarman D.R., Ulbrich A., Gall D.L., Smith R.W., Yusko L.M., Fox B.G., Noguera D.R., Coon J.J., Donohue T.J. Novosphingobium aromaticivorans uses a Nu-class glutathione S-transferase as a glutathione lyase in breaking the β-aryl ether bond of lignin. Journal of Biological Chemistry, 293, 4955-4968. doi: 10.1074/jbc.RA117.001268 (2018)
  39. Terashima M., Ohashi K., Takasuka T.E., Kojima H., Fukui M. Antarctic heterotrophic bacterium Hymenobacter nivis P3T displays light-enhanced growth and expresses putative photoactive proteins. Environmental Microbiology Reports, doi:10.1111/1758-2229.12702 (2018)
  40. Takeda S., Sakurai T., Hui S.P., Fuda H., Chiba H. Effects of enzymes on elastic modulus of low-density lipoproteins were investigated using atomic force microscopy. Biochemical and Biophysical Research Communications, 501(3), 607-611 (2018)
  41. Yamamoto Y., Furukawa T., Takeda S., Kashida H., Chiba H., Hui S.P. Examining the effect of regioisomerism on the physico-chemical properties of lysophosphatidylethanolamine-containing liposomes using fluoro probes. Chemistry and Physics of Lipids, 216, 9-16 (2018)
  42. Suherman, Hossain Md. M., Morita K., Kawaguchi T. Effect of metal film thickness and various solvents on the SPR biosensor sensitivity for illegal compound detection. Oriental Journal of Chemistry, 34(3),1355-1361 (2018)
  43. Oka M., Uchida Y. Heavy metals in slag affect inorganic N dynamics and soil bacterial community structure and function. Environmental Pollution, 243 Part A, 713-722 (2018)
  44. Uchida Y., Mogi H., Hamamoto T., Nagane M., Toda M., Shimotsuma M., Yoshii Y., Maeda Y., Oka M. Changes in denitrification potentials and riverbank soil bacterial structures along Shibetsu River, Japan. Applied and Environmental Soil Science, Vol. 2018, Article ID 2530946 (2018)
  45. Carlton A.J., Cameron K.C., Di H.J., Edwards G.R., Clough T.J. Nitrate leaching losses are lower from ryegrass/white clover forages containing plantain than from ryegrass/white clover forages under different irrigation. New Zealand Journal of Agricultural Research, 62 (2), 150-172 (2018)
  46. Gardiner C.A., Clough T.J., Cameron K.C., Di H.J., Edwards G.R., de Klein C.A.M. Assessing the impact of non-urea ruminant urine nitrogen compounds on urine patch nitrous oxide emissions. Journal of Environmental Quality, 47 (4), 812-819 (2018)
  47. Woods R.R., Cameron K.C., Edwards G.R., Di H.J., Clough T. Reducing nitrogen leaching losses in grazed dairy systems using an Italian ryegrass-plantain-white clover forage mix. Grass and Forage Science, 73 (4), 878-887 (2018)
  48. Tanaka T., Tamura K., Ashikaga K., Fujii H., Yamada T. Marker-based paternity test in polycross breeding of timothy (Phleum pratense L.). Crop Science, 58(1), 273-284 (2018)
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